PhenoGen Informatics
The site for quantitative genetics of the transcriptome.
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Working...Genes should load within 5-10 seconds. Regions depend on the size(ex. 5 Megabases may take ~1 minute).
1. Enter a gene identifier(e.g. gene symbol, probe set ID, Ensembl ID, etc.) in the gene field.
Enter a region such as
chr1:1-50000 is Chromosome 1 @ bp 1-50,000.
chr1:5000+-2000 is Chromosome 1 @ bp 3,000-7,000.
chr1:5000+2000 is Chromosome 1 @ bp 5,000-7,000.
chr1:50.126-51.345 is Chromosome 1 @ 50,126,000-51,345,000
chr1:50.15+-100.0k is chromosome 1 @ 50,050,000-50,250,000
Click on the Translate Region to Mouse/Rat to find regions on the Mouse/Rat genome that correspond to a region of interest in the Human/Mouse/Rat genome.
2. Choose a species.
3. Click Get Transcription Details.

Hint: Try other synonyms if the first ID that you enter is not found.

ERROR:No Ensembl ID found for the ID entered.

The Gene ID entered could not be translated to an Ensembl ID to retrieve gene information. Please try an alternate identifier for this gene. This gene ID has been reported to improve the translation of many Gene IDs to Ensembl Gene IDs.

Note: At this time if there is no annotation in Ensembl for a gene we will not be able to display information about it, however if you have found your gene of interest on Ensembl entering the Ensembl Gene ID, which begins with ENSRNOG or ENSMUSG, should work.


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