PhenoGen Informatics
The site for quantitative genetics of the transcriptome.
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Working...Genes should load within 5-10 seconds. Regions depend on the size(ex. 5 Megabases may take ~1 minute).
1. Enter a gene identifier(e.g. gene symbol, probe set ID, Ensembl ID, etc.) in the gene field.
Enter a region such as
chr1:1-50000 is Chromosome 1 @ bp 1-50,000.
chr1:5000+-2000 is Chromosome 1 @ bp 3,000-7,000.
chr1:5000+2000 is Chromosome 1 @ bp 5,000-7,000.
chr1:50.126-51.345 is Chromosome 1 @ 50,126,000-51,345,000
chr1:50.15+-100.0k is chromosome 1 @ 50,050,000-50,250,000
Click on the Translate Region to Mouse/Rat to find regions on the Mouse/Rat genome that correspond to a region of interest in the Human/Mouse/Rat genome.
2. Choose a species.
3. Click Get Transcription Details.


Region Summary Region Gene Expression Region Gene eQTLs Region WGCNA Gene Summary Gene eQTLs Gene Tissue Expression Gene WGCNA Gene miRNA targeting
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Region Image
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Track Details
Genes with an eQTL in this region
Region Summary
Track List:
Break down of track count*

*Note: Depending on the track settings some features may not be displayed and will not be reflected in the image above.
Features in Selected Track
Selected Feature Image