Current Datasets
| Species | Animal Type | Source Details | Panel | Tissue | Array | Number of Strains  |
Samples per Strain |
Where can I access this data? |
|---|---|---|---|---|---|---|---|---|
| Rat | Inbred Strains | Adult Male | HXB progenitors | Whole Brain | CodeLink Whole Genome | 3 |
4-6 | Custom Datasets |
| Rat | Inbred Strains | Adult Male | 6 Inbred Strains | Whole Brain | Affymetrix Rat Exon Array | 6 |
4 | Custom Datasets |
| Rat | Inbred Strains | Adult Male | 6 Inbred Strains | Heart - left ventrical | Affymetrix Rat Exon Array | 6 |
4 | Custom Datasets |
| Rat | Inbred Strains | Adult Male | 6 Inbred Strains | Liver | Affymetrix Rat Exon Array | 6 |
4 | Custom Datasets |
| Rat | Inbred Strains | Adult Male | 6 Inbred Strains | Brown fat | Affymetrix Rat Exon Array | 6 |
4 | Custom Datasets |
| Rat | Inbred Strains | Kupffer cells (fresh/cultured/MACS) | 4 Inbred Strains | Liver (cells) | Affymetrix Rat Exon Array | 4 |
4 | Custom Datasets |
| Rat | Inbred Strains | Hepatic Stellate cells (fresh) | 4 Inbred Strains | Liver (cells) | Affymetrix Rat Exon Array | 4 |
4 | Custom Datasets |
| Rat | Inbred Strains | Hepatocyte cells (fresh/cultured) | 4 Inbred Strains | Liver (cells) | Affymetrix Rat Exon Array | 4 |
4 | Custom Datasets |
| Rat | Inbred Strains | Sinusoidal endothelial cells (fresh/cultured) | 4 Inbred Strains | Liver (cells) | Affymetrix Rat Exon Array | 4 |
4 | Custom Datasets |
| Rat | Recombinant Inbred Panels | Adult Male | HXB RI | Whole Brain | CodeLink Whole Genome | 28 |
4-6 | Precompiled Datasets, Downloads, Custom Datasets |
| Rat | Recombinant Inbred Panels | Adult Male | HXB RI | Whole Brain | Affymetrix Rat Exon Array | 23 |
3-4 | Precompiled Datasets, Genome/Transcriptome Browser, Downloads |
| Rat | Recombinant Inbred Panels | Adult Male | HXB RI | Heart - left ventrical | Affymetrix Rat Exon Array | 23 |
3-4 | Precompiled Datasets, Genome/Transcriptome Browser, Downloads |
| Rat | Recombinant Inbred Panels | Adult Male | HXB RI | Liver | Affymetrix Rat Exon Array | 23 |
3-4 | Precompiled Datasets, Genome/Transcriptome Browser, Downloads |
| Rat | Recombinant Inbred Panels | Adult Male | HXB RI | Brown Fat | Affymetrix Rat Exon Array | 21 |
3-4 | Precompiled Datasets, Genome/Transcriptome Browser, Downloads |
| Rat | Selected Lines | Adult Male | 8 pairs | Whole Brain | CodeLink Whole Genome | 8 |
4-6 | Custom Datasets |
| Rat | Selected Lines | Adult Male | 6 pairs | Whole Brain | Affymetrix Rat Exon Array | 6 |
4-6 | Custom Datasets |
| Rat | HXB progenitors | Adult Male | Whole Brain | RNA-Seq of total RNA(Helicos) | 2 |
3/strain (70M reads/sample) | Genome/Transcriptome Browser, Downloads |
|
| Rat | HXB progenitors | Adult Male | Whole Brain | RNA-Seq of total RNA(Illumina) | 2 |
3/strain (100M reads/sample) | Genome/Transcriptome Browser, Downloads |
|
| Rat | HXB progenitors | Adult Male | Whole Brain | RNA-Seq of PolyA+ RNA(Illumina) | 2 |
3/strain (50M reads/sample) | Genome/Transcriptome Browser, Downloads |
|
| Rat | HXB progenitors | Adult Male | Whole Brain | RNA-Seq of small RNA(Illumina) | 2 |
3/strain | Genome/Transcriptome Browser, Downloads |
|
| Rat | HXB progenitors | Adult Male | Liver | RNA-Seq of total RNA(Illumina) | 2 |
3/strain (80M reads/sample) | Genome/Transcriptome Browser | |
| Rat | HXB progenitors | Adult Male | Liver | RNA-Seq of small RNA(Illumina) | 2 |
2-3/strain | Genome/Transcriptome Browser | |
| Rat | HXB progenitors | Adult Male | Heart | RNA-Seq of total RNA(Illumina) | 2 |
4/strain (90M reads/sample) | Genome/Transcriptome Browser | |
| Rat | HXB progenitors | Adult Male | Heart | RNA-Seq of small RNA(Illumina) | 2 |
3/strain | Genome/Transcriptome Browser | |
| Rat | HXB progenitors | Adult Male | Liver | Full genome sequencing | 4 |
2/strain | Genome/Transcriptome Browser, Downloads |
|
| Mouse | Inbred Strains | Adult Male | 28 inbred strains | Whole Brain | Affymetrix Mouse 430 v2 | 28 |
4-6 | Precompiled Datasets, Downloads, Custom Datasets |
| Mouse | Inbred Strains | Adult Male | 4 inbred strains | Whole Brain | Affymetrix Mouse Exon Array | 4 |
3-36 | Custom Datasets |
| Mouse | Recombinant Inbred Panels | Adult Male | BXD RI | Whole Brain | Affymetrix Mouse 430 v2 | 32 |
4-7 | Precompiled Datasets, Custom Datasets |
| Mouse | Recombinant Inbred Panels | Adult Male | LXS RI | Whole Brain | Affymetrix Mouse Exon Array | 61 |
4-6 | Precompiled Datasets, Custom Datasets |
| Mouse | Selected Lines | Adult Male | 7 pairs | Whole Brain | Affymetrix Mouse 430 v2 | 7 |
4-6 | Custom Datasets |
| Mouse | Genetically Modified | Adult Male | 8 pairs | multiple | Affymetrix Mouse 430 v2 | 8 pairs |
3-6 | Custom Datasets |
| Mouse | LXS progenitors | Adult Male | Whole Brain | RNA-Seq of total RNA(Illumina) | 2 |
3/strain (70M reads/sample) | Genome/Transcriptome Browser |